Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890995.1_cds_XP_016445704.1_40639
CDS Infomation

[gene=LOC107770885] [db_xref=GeneID:107770885] [protein=chlorophyllide a oxygenase, chloroplastic-like] [protein_id=XP_016445704.1] [location=join(124308..124379,124970..125206,125576..125680,125893..126168,126378..126525,126624..126808,126914..127026,127231..127525,127945..128109)] [gbkey=CDS]
Sequence

ATGACAGCCATTACTACTGCTCTTTCTCTTCCTTTCTCTTTGTGCCGCTCTACTAAGTCT
TATACTAGAAAGTATGTCAAAGGGAGCTTTGGAGTTTTTGCAGTATATGGGGAGGAGGGT
GGGATGCCAGATAAGACAAGTTCCTGGTTGACACTCTTTAATGTGGAAGATCCCAGGTCT
AAAGTTCCACAAATTAAAGGCAGATTCTTGGATGCAAATCAAGCTTTACAAGTTGCTAGA
TATGATCTACAATACTGTGATTGGCGAGCTCGGCAAGATGTACTTACAATCATGCTGCTG
CATGAAAGGGTTGTGGAAGTGTTGAACCCTCTAGCACGCGAATACAAATCTATTGGAACC
ATGAAAAAGGAACTTGCAGAGTTGCAAGGAGAACTTTCTCAGGCCCACAACCAGGTACAT
ATATCTGAGGCCCGGGTTTCTGCTGCTTTGGATAAGCTAGCTTACATGGAAGAGTTGGTT
AATGATAGGCTTCTGCAAGAGAGAAGCACGGCAGAATCAGATTGCCCGTCCTCCTCTGCC
AGTACGTCAACAGCATTATTGGATACTGTTAAAAGCAAGCAACCCCGAAGAACCTTGAGT
GTGTCAGGTCCTGTCCAAGATTACAGTTCCCGTTTGAAGAACTTTTGGTACCCTGTTGCT
TTCTCCGCAGATCTTAAGGATGACACCATGTTACCGATTGATTGCTTTGAGCAACCATGG
GTGATCTTTCGCGGGAATGATGGAAAACCTGGATGTGTACAGAATACATGTGCACATAGA
GCCTGCCCCCTTGATCTTGGCTCAGTGAAAGAGGGACGCATTCAGTGCCCTTATCACGGA
TGGGAATATTCGACTGATGGCAAGTGTGAGAAAATGCCATCAACACGATTACTGAATGTA
AAGATCAAAGCACTGCCCTGCTTTGAGCAAGAGGGAATGATATGGATTTGGCCAGGAAAT
GACCCCCCTGCAGCTACCCTTCCTTCTTTACTACCGCCTTCTGGATTTCAAATCCATGCG
GAGATAGTCATGGAACTTCCAGTGGAACATGGGCTATTATTAGACAATCTGTTGGATCTT
GCACATGCTCCTTTCACCCATACATCAACCTTTGCTAAAGGATGGAGTGTCCCAAGCTTG
GTGAAGTTTTTGACTCCTGCATCTGGTCTGCAAGGATATTGGGATCCTTATCCAATAGAT
ATGGAATTTAGACCACCTTGTATGGTTTTATCAACCATTGGAATCTCAAAGCCAGGCAAA
TTGGAGGGGCAGAGTACCAAGCAGTGTTCTACACACCTTCATCAACTTCATGTTTGCTTA
CCTGCATCACGACACAAGACACGGTTATTATATAGGATGTCACTGGATTTTGCTCCCCTG
CTGAAACACATCCCTTTCATGCAATATGTTTGGAGACATTTTGCTGAACAGGTTTTAAAT
GAAGACCTACGGCTTGTGTTGGGCCAGCAGGATCACATGCTCAATGGCGCCAATATTTGG
AACCTGCCAGTGTCTTACGATAAGCTAGGTGTGAGGTATAGAATATGGAGAGATGCTGTA
GACAGTGGAGCAAAGCAGCTACCATTCAGCAAATAA

Peptide Sequence

PEP ID

XP_016445704.1
PEP Infomation

PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Nicotiana tabacum]
Sequence

MTAITTALSLPFSLCRSTKSYTRKYVKGSFGVFAVYGEEGGMPDKTSSWLTLFNVEDPRS
KVPQIKGRFLDANQALQVARYDLQYCDWRARQDVLTIMLLHERVVEVLNPLAREYKSIGT
MKKELAELQGELSQAHNQVHISEARVSAALDKLAYMEELVNDRLLQERSTAESDCPSSSA
STSTALLDTVKSKQPRRTLSVSGPVQDYSSRLKNFWYPVAFSADLKDDTMLPIDCFEQPW
VIFRGNDGKPGCVQNTCAHRACPLDLGSVKEGRIQCPYHGWEYSTDGKCEKMPSTRLLNV
KIKALPCFEQEGMIWIWPGNDPPAATLPSLLPPSGFQIHAEIVMELPVEHGLLLDNLLDL
AHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK
LEGQSTKQCSTHLHQLHVCLPASRHKTRLLYRMSLDFAPLLKHIPFMQYVWRHFAEQVLN
EDLRLVLGQQDHMLNGANIWNLPVSYDKLGVRYRIWRDAVDSGAKQLPFSK

Transcript Sequence

Gene sequence data has not been registered.